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This issue thread will consist of all the edits that need to be made to improve existing Coding Club tutorials!
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Hi,
I'm trying to use mFD with fish data and I'm running in to issues with non-euclidean distances.
Any help or suggestions would be appreciated.
My taxa data consists of 18 sites x 59 taxa and m…
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Hello,
I would like to know if it's possible to do some interaction heatmap plot and PCoA Euclidean space plot with the new tutorial on ASD with Factor map. I tried to do some interaction plots wit…
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Hi chi,
I use trans_norm provides several data normalization. Then, I want to creat PCOA by use the "clr" microtable object.
but it didn't work. I readed the microeco_tutorial. It It describes it…
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When using a fixed distance band to identify neighbors we can be sure that the neighbors matrix is symmetrix when the lower bound is set to zero. We should set the attribute `sym = TRUE` in these case…
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Dear MPSE developer,
Recently I try to use MicrobiotaProcess to do microbiome data analysis. This is a very nice R package as far as I know.
So, I installed it and learn it based on the [documen…
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Hello, thank you for providing these useful tools for studying bacterial genomes, which have helped me a lot.
During the process of using `panstripe`, I noticed that you used the tSNE dimensionality…
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[dados_analise.txt](https://github.com/holtzy/R-graph-gallery/files/14807204/dados_analise.txt)
[matriz_atributos.csv](https://github.com/holtzy/R-graph-gallery/files/14807211/matriz_atributos.csv)
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**Submitting author:** @wsmets (Wenke Smets)
**Repository:** https://github.com/LebeerLab/tidytacos
**Branch with paper.md** (empty if default branch): master
**Version:** v0.3.0
**Editor:** @diazrena…
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Apologies, this question is asked in earnest ignorance: when I run lc.dist (which I understand relies on gdistance), are the distances returned Euclidean distances?
Many thanks,
Sean