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First dose
https://codelists.opensafely.org/codelist/opensafely/covid-19-vaccination-first-dose-not-given/6fa9dc47/
Second dose
https://codelists.opensafely.org/codelist/opensafely/covid-19-vacci…
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Comment Spiros on previous issue (#216)
> I've had a closer look at this and my opinion is to ignore EMIS/TPP local codes entirely with some exceptions (see below).
> These codes are almost exclus…
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Four new tables, very similar to the already mapped gp_clinical and gp_prescription.
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In #824, there was a note about a need to review the only-ordo supported is-as relationships?
It also came up in https://github.com/EBISPOT/efo/issues/553
MONDO_0009061 'Cystic fibrosis': from @pa…
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I'm not sure, if this related to the reported scientific notation issue https://github.com/ohdsi-studies/Covid19CharacterizationCharybdis/issues/68.
In cohorts 126-141 there is a concept
> "conce…
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Hi, there. I found lacking character `/` at the following lines in SKK-JISYO.L
sars-cov /severe acute respiratory syndrome coronavirus/SARSコロナウイルス
sars-cov-2 /severe acute respiratory syndrome cor…
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- [x] extract viral reads
- [x] create subfolder `extract` for virus plots (1kbp windows, high res compared to bacteria)
- [x] `extract_viral_reads.sh`
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**Is your feature request related to a problem? Please describe.**
There was a TODO for a figure showing the structure of the genome that predates my edit, though I did put it into a `TODO:` commen…