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Hello, I have been working on structural analysis of an animal and have used a lot of ANTs software. This time, I finally managed to run the `antsCorticalThickness.sh` script through debugging and obt…
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Enables an packaging and since niftyreg is not as manintained anymore. Will need to possibly rework some scripts to take in the ANTS transform output rather than niftyreg
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**Describe the bug**
The functions `ants.to_nibabel(ants_img)` and `ants.from_nibabel(nib_img)` appear to be missing from the 0.5.3 release. Have they been removed intentionally?
**To reprod…
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**Describe the bug**
| memory limit specified | memory used by ANTs |
| --- | --- |
| 16 Gb | 23 Gb |
| 16 Gb | > 18 Gb |
| 40 Gb | 45 Gb |
This is particularly a problem on clusters t…
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Even after increasing the crop size to `35x35x0` (https://github.com/valosekj/dcm-brno/issues/14#issuecomment-2210748905), `sct_dmri_moco` is still crashing for the following subjects.
https://gith…
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Hi, I am trying to use ANTS, but getting this issue:
I am trying to open .nii file
image='path/brain.nii'
brain_extracted_image = ants.image_read(image)
File "/Library/Frameworks/Pyt…
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I'm looking to save transforms in the same HDF5 file that contains my data, but in a different data group (so I can keep them together, share it as a single file, etc.).
Currently I'm building a wo…
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It is really hard for me to drop ants when moving.
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These ants are either white or blue (depending on gender or something).
They are peace loving, and have bonuses in peaceful activities, but penalties in warfare.
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@ntustison
**Describe the bug**
When attempting to plot an ANTsImage using **`ants.plot(img_test)`**, the program throws a `ValueError` stating that the image size of 165888x540 pixels is too large…