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Hi,
I have generated an alignment between 2 genomes using progressiveMauve (default parameters) and I'm now trying to extract SNPs using snp-sites.
My issue is that I get the error message: '' A…
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Hi Esteye, Yuti:
For a start, I think we need to
(1) find the data - is there a centralized database(s) out there or do we need to pull out information from separate sources
Lets work on findi…
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So, Turkey reported over 800k cases in the last 24 hours. Unlike most other artifacts, this one not only _seriously_ distorts the daily chart for Turkey but also makes a dent in the global chart:
Tu…
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Respected Sir,
I tried to run yours filter for my dataset and getting following error while running `#import pandas as pd
confirmed=pd.merge(confirmed, population,how='left' ,on=['Province/State','C…
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Hello,
My name is Nigel Todman, I'm a software developer from Canada. I've written a Python script to parse the JHU CSSE Data from GitHub and produce various stats and metrics. Perhaps this would b…
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Hi all,
Creating this issue as a placeholder for any canonical links for acronyms, abbreviations, and references in the Responsible Use note: https://w3c.github.io/sdw/responsible-use/
Cheers,
Jo
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Is mentioned elsewhere (https://github.com/thibautjombart/covid19_bed_occupancy/issues/47) we should not rely on a single set of LoS distributions. It would be good to scan the literature for new dist…
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## Summary of this new feature
I have read about stochastic models (Imperial college covid response team uses them a lot) as well as agent-based models (https://www.nature.com/articles/s41467-020-193…
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# hackseqRNA: COVID19 Ultra-hackathon
## Core Objectives
- We are in the midst of pandemic. The general sentiment is of fear and uncertainty. Bioinformaticians and RNA-biologists are at a unique …
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For those using Pandas, I propose the following fix for the 3/12 and 3/15 problems (wrong data, that apparently is not going to be corrected). Sources are cited. Not all the corrections, but the vast …