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I'm looking into the AIND format option for inputting data into the pipeline. The readme states
> aind: data ingestion used at AIND. The input folder must contain an ecephys subfolder which in turn…
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* Data analysis flow to metadata
* Data analysis
:standalone
- MQ t…
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# Overview for the next few tasks
- Ingest all 2023 data sources relevant to the banking dashboard project
- Run the 2023 data through the 2022 data processing pipeline
- Inspect the process / re…
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We would love to be able to ingest data continuously without having to do it manually like on a daily/weekly basis
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In my current setup, there are some steps between ingesting data and producing the final data product table.
For example, I don't treat intermediate tables as data products. Instead, I created data…
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As soon as we have pan-UKBB LD the most logical thing is to ingest pan-UKBB GWAS for respective ancestries.
https://pan.ukbb.broadinstitute.org/downloads
It includes ingestion and EFO mapping.