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**When attempting to install dMRI-AMICO in Ubuntu I get an error:**
tz@ALPINE:/mnt/e$ pip install dmri-amico
Defaulting to user installation because normal site-packages is not writeable
Collecti…
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Error in contrast & file path:
> mgh-3t_connectome_MS_SC_003_011816_2/dmri /dmri .nii.gz
instead of :
> mgh-3t_connectome_MS_SC_003_011816_2/dmri /dmri.nii.gz
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- to unroll 4D data over the 4th dim,
- optional input of ROI set or mask
- option to cluster the rows (spatial/voxel-wise) and/or columns (time or gradients),
- as well as select specific rows a…
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Dear maintainers, thank you for resolving my previous issue. I am now on the newer version of dtiplayground as you suggested, and it runs. However, I get this error while running a protocol containing…
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https://github.com/finnlennartsson/kpum_noddi/blob/94e7db78fd2b0e7bad849225fd5126fa37df62ea/shell/dmri_5TT_registration.sh#LL193C1-L256C1
Check with Domagoj.
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from Ron
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@tsalo and I have been working on getting the derivatives of our dMRI post-processing workflows into BEP16 compliance. We'd appreciate some thoughts and comments on the file names we're producing. Per…
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Epic: #35
Feature: #66
Feature Release:
Required knowledge: mid-level
### Description
As a member of pipeline team, I want to prepare a summary of the most recent and popular dMRI QC methods, so t…
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# Dmipy: Diffusion Microstructructure Imaging in Python Made Easy
***By Rutger Fick, TheraPanacea***
- Theme: Open Workflows
- Format: Keynote
## Abstract
Rutger Fick, Matteo Frigo, Sara Sedlar, Rac…
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Inline images are not being displayed inline, e.g.:
https://carpentries-incubator.github.io/SDC-BIDS-dMRI/diffusion_tensor_imaging/index.html
It looks like the the class is not yet available throu…