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Previous submissions of the fission yeast genome have used "locus_tag" for the systematic identifier (since before 2002).
We are now being asked to use "old_locus_tag" because the PomBase locus_tag…
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Please provide as much information as you can:
* **Suggested term label:**
we need a term to represent repression of the yeast to hypha transition for S. japonicus.
The term exists, but it is…
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If we want types, (which are be useful) maybe we should all specify
protein, ncRNA…
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I was looking at the “unknowns” and thought it was odd to see these 'unknown' genes annotated to
“regulation of cell size”
100.00% 48.00 YCR061W, YBR093C, YGR111W
I don't think we should ann…
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reviewed here for fission yeast
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9041340/
useful for modelling the pathway quickly.
I have captured already most of the 'causal model' in figure 4.
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Column 15 in the phaf format is described as:
> Penetrance describes the proportion of a population that shows a cell-level phenotype. Penetrance data are represented as percents or entries from th…
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Please provide as much information as you can:
* **Suggested term label:**
This is a first stab at this term, open to suggestions:
transcriptional interfering lncRNA activity
* **Definiti…
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We use this for NAS, I can't find the memo about deprecation, but I have 641 errors in the GO checks file.
what reference should we use for NAS?
I usually use it when I am expecting the annota…
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* **ARBA rule (ID and label):**
GO:0140097 | catalytic activity, acting on DNA | IEA with ARBA00027986 | GO_REF:0000117
* **Sequences with problematic annotation (ID + gene/protein name):**
p…
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Dear einprot developers,
Currently einprot supports the following species
```
> getSupportedSpecies()
taxId species speciesCommon
1 10090 …