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I noticed that pGlyco does NOT seem to assign one glycopeptide with more than one glycan at a time. For example, the sequence **N**GTGPCP**N**VSTVQCTHGIK, the output result from pGlyco only assigns gl…
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Hey Joshua,
I am afraid that the linearcode.dumps() function might have inconsistency with the linear code rule.
For example, if we have a glycan as below:
```
RES
1b:x-dglc-HEX-1:5
2s:n-acet…
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Good afternoon Michelle,
We would like to request a new term; 'synaptosome' or, alternatively, ‘synapse’ as descriptor for data on N-glycans and glycoproteins in synaptosomal preparations (e.g., PM…
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[Wurcs2Component functionality](https://bitbucket.org/glycosw/wurcsrdf/issues/5/monosaccharide_alias) is available on a branch. However not tested fully. Also, it is only generating wurcs components…
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This issue contains monthly updates to an automatically ranked list of PubMed papers as candidates for curation in the Bioregistry. Papers may be relevant in at least three ways:
(1) as a new prefix…
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Hi all,
I made a pull request with three exemplary annotations for MSI data to start a discussion: https://github.com/bigbio/proteomics-metadata-standard/pull/450
Here are some thoughts about t…
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I'm looking at the enzyme ABO (https://api.glygen.org/protein/detail/P16442-1). In UniProt and GlycoEnzDB, it says that ABO catalyses very specific reactions, adding a GalNac or Gal to a Gal-Fuc:
…
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Understanding how the human gut microbiota and host are affected by probiotic bacterial strains requires carefully controlled studies in humans and in mouse models of the gut ecosystem where potential…
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This issue contains monthly updates to the ranked list of PubMed papers for curation. The full list can be found [here](https://github.com/tanayshah2/bioregistry/blob/5560dcf284f2c0309287e0a5a551e435e…
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## **Module/Workflow/Library affected**
caprieval capri_clt files
## **Expected behavior**
the capri_clt files should be consistent with the capri_ss files
## **Actual behavior**
when debug =…