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We deal often with big data, hence we usually read and/or process HDF5 data in chunks.
Usually this results in an optimizing problem between available RAM (with too large chunks we run out of memory)…
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Tests are failing for me locally. Assuming that the problem was that I am using the latest hdf5 version, I tried using both the the stable version of `hdf5` and `hdf5-git` from the AUR but both fail t…
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```
Input
Grid
x (x coord of grid)
y (y coord of grid)
grid code (grid element number)
elev (grid element elevation)
manning (grid element manning's n value)
neighbors (Grid element neigh…
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It is now twice that HBT+ has failed to load/save a specific file and continued to run. This is annoying since the user may not be aware of any problems if they see the job completed, unless they expl…
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runinfo.measured is important for existing plot commands like PlotGenerator(). When you use the expt created in a jupyter notebook, the measured list is present. If you use ps.load_experiment(), mea…
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- [x] drop h5cpp dependency in favor of ~highfive headers~ HDF5 C API.
- [x] remove hio's mutex and rely on `--enable-threadsafe` HDF5 library build (see https://github.com/WireCell/wire-cell-spack/c…
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Hello, dear Sevan,
After running the scenicplus pipeline, I obtained ctx_results.hdf5 AND dem_results.hdf5 result where I generated 25 topics and annotated eight cell types in my work.
However, the …
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**Describe the bug**
Building on MacOSX for IPhoneOS / IPadOS fails.
/hdf5/src/H5system.c:708:22 Call to undeclared function 'getcwd'; ISO C99 and later do not support implicit function declaratio…
jebos updated
2 weeks ago
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Hi there,
Tried to download and open the RIR dataset with the HDF5 format.
I used your notebook:
```
path_to_rirs_hdf = path_to_data / Path('dEchorate_rirs_gzip7.hdf5')
rir_dset = h5py.File(p…
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One additional thing we need is the capacity to save results in a machine readable way. It would be ideal if an entire instance of `KickMCMCResults` could be saved in hdf5. Running the MCMC and anal…