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We tried running the SOAPdenovo_array.sh script using 30 .fq files of total size 557GB as input and a reference genome with a total size of approximately 17GB.
The SOAPdenovo_array.sh script requires…
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_Issue [JP-3706](https://jira.stsci.edu/browse/JP-3706) was created on JIRA by [Ned Molter](https://jira.stsci.edu/secure/ViewProfile.jspa?name=emolter):_
To save memory while computing the median …
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Loading sequence file...
Allocating Memory...
Initializing data structures...
Computing TR Model Statistics...
Scanning Sequence 4...Traceback (most recent call last):
File "/data/CentIERv3.0/C…
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### Issue type
Build/Install
### Have you reproduced the bug with TensorFlow Nightly?
Yes
### Source
source
### TensorFlow version
tensorflow-gpu 1.14.0
### Custom code
Yes
### OS platform a…
JJGNB updated
1 month ago
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bbduk can use a lot of memory and that can cause it to fail, especially in a shared computing environment like an HPC. Detect this, and auto increase the amount of memory reserved for the task then re…
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**Title of the talk/workshop**
Data Storytelling in Python
**Abstract of the talk/workshop**
Using Python libraries to analyse data
**Category of the talk/workshop**
Exploratory Data Anal…
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## Problem Overview
![image](https://github.com/user-attachments/assets/c5fb50d4-30e7-4e36-b2c0-dfb5d31f355a)
1. The sequence length is 470,685,350 base pairs (bp).
2. The running time exceeds 38…
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Hi, I would like to ask about the graphics card used in the article and the time of model training . What is the minimum computing power requirement?Thanks for your assisstance.
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Hi, I am new to presto and I am having memory-related problems with presto and would like to ask for help. I configured presto with 8GB of jvm memory, every time I performed a query calculation, prest…
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Hi,
I am working with a very larger sc/sn RNA-Seq dataset. Starting from an h5ad file have used BPcells package to load data in-memory as follows:
`raw