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**Is your feature request related to a problem? Please describe.**
We're trying to walk people through a semi-automated acquisition / chained analysis using the simulator
**Describe the solution y…
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Trying to run the 3D demo with fewer particles (first 30 particles) and get
```
Warning: Padding initial configuration with zeros to achieve full dimension.
> In mdscale (line 374)
In MDS_Clust…
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Brain cell finder is a tool for fully automated localization of soma in 3D mouse brain images acquired by confocal light sheet microscopy.
https://github.com/paolo-f/bcfind
Started here:
https:…
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```
Hi,
Congratulations for the paper. I'd like to request an enhancement:
Would it be possible for ThunderSTORM to include a column for z uncertainty,
and to treat x, y, and z uncertainty the same…
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**Describe the bug**
```
DEBUG:PYME.cluster.rules:DataSource.__class__:
PatchedServiceInfo(type='_pyme-taskdist._tcp.local.', name='PYMERuleServer:greenback - PID:18119._pyme-taskdist._tcp.local…
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Extension name (optional): 4DN-BINA OME Advanced + Confocal extension
Element name(s): NBOA:SpinningDisk
Field name(s):
- DiskPinholeDiameter
- DiskPinholeSpacing
- DiskBypass
- Homogeniz…
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What's in this image?
![plate1_1_013](https://github.com/user-attachments/assets/24f0e4d6-72ea-449a-b191-03ddaec3b155)
Source: Heriche et al
License: [CC BY 4.0](https://creativecommons.org/li…
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Thanks for your helpful pointers in #147, I have another API-related question :)
Is there a way for me to pull microscopy image magnification from the API?
I imagine this info would have been in…
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[SPA.zip](https://github.com/YPZ858/Super-res-code/files/8919107/SPA.zip)
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- [x] New term : decreased punctate nuclear protein localization during meiotic prophase I
A cell phenotype observed during prophase of the first division of the meiotic cell cycle in which a protein…