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# Protein Inception | Liam's Blog
Protein design by hallucination. DeepDream, Markov Chain Monte Carlo (MCMC), KL divergence, gradient optimization, scaffolding functional sites, SARS-CoV-2 receptor …
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Learn L (number of intervals) and each quantile point of unknown distribution function F.
## [code](https://colab.research.google.com/drive/1BwXO_MlslMqY4wBHrXppAb42BBP37r8H?usp=sharing)
## ref
[Qu…
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For consideration to add: [JAGS (Just another Gibbs sampler)](http://mcmc-jags.sourceforge.net/) — Cross-platform program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (M…
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Not indendently, but by using Markov chain Monte Carlo. - should read "independently".
implicitly center the paremters around zero - should read "parameters".
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Add nested-Rhat as described in
- Charles C. Margossian, Matthew D. Hoffman, Pavel Sountsov, Lionel Riou-Durand, Aki Vehtari, Andrew Gelman (2022). Nested Rˆ: Assessing the convergence of Markov ch…
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I just stumbled upon an article published at COLT 2015:
> In order to avoid this cost, recently Kang (2013) considered a Markov chain Monte Carlo (MCMC) algorithm to sample from determinant point pro…
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- [flowMC](https://github.com/kazewong/flowMC): Normalizing-flow enhanced sampling package for probabilistic inference
- [Efficient Bayesian Sampling Using Normalizing Flows to Assist Markov Chain Mo…
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### Discussed in https://github.com/orgs/StatisticalRethinkingJulia/discussions/156
Originally posted by **Zhe-Jessica** March 2, 2023
Hi, I notice that trankplots() and precis() function has…
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Hello, I'm studying the possibility of using this crate for Markov Chain Monte Carlo (MCMC) based inference. In this use case, the log-density of a distribution is evaluated repeatedly at different pa…
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http://nbviewer.jupyter.org/github/demotu/BMC/blob/master/notebooks/CurveFitting.ipynb
http://nbviewer.jupyter.org/format/script/github/demotu/BMC/blob/master/notebooks/CurveFitting.ipynb
http://nbv…