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Hello, I encounter this error when trying to generate the topology:
```
OpenMMException Traceback (most recent call last)
in ()
67
68 # solvate it in 0.15 …
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Because @erights asked for it...
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Currently, phantom membranes can only be collected on SwitchCraft through a 3% chance every night if you sleep with a cat. This makes collecting phantom membranes difficult. It would be nice to have a…
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## Analysis Goal (What should be done / analysed?)
I'd like to create a notebook for segmenting the image below. I _think_ a seeded watershed algorithm can do it. Unfortunately, I do not have seeds…
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Membranes are weird, and I think you did a great job explaining how this proposal could operate with membranes. I can see an issue with transparency when leaking private symbols.
The fact that the …
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Hi all,
I have a question/request regarding selections in Molecular Nodes. We recently published a [MDAKit](https://github.com/BioMemPhys-FAU/domhmm) to identify domains in membranes. I think it wo…
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Hi Brian,
I have been playing around with your 3d plotting functions and added multi-channel support, and the thick "slab" projection, into your interactive (ipywidgets) function. I have made one i…
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## Analysis Goal (What should be done / analysed?)
I would like to segment the nuclei in this image, e.g. using Voronoi-Otsu-Labeling.
## Image Upload
📎 **Drag & drop your microscopy image here…
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This is human_mitosis.png:
![human_mitosis](https://github.com/user-attachments/assets/c1bf94c5-fe80-4ff9-a46e-d4d9cb9f276f)
I would like to segment and label the bright nuclei in it, using the …
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## Analysis Goal (What should be done / analysed?)
Segment the nuclei in this image using Voronoi-Otsu-Labeling. While loading the image, make sure to use the first channel only.
## Image Upload…