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## Expected Behavior
[dataset.zip](https://github.com/user-attachments/files/16023829/dataset.zip)
I have a group of sequences which is properly aligned with almost full length and >95% identity usi…
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I am trying to run a `foldseek easy-search` job with the UniProt database built from `foldseek databases Alphafold/UniProt`. With two different attempts on different machines (with up to 256GB memory)…
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Pandemic
WHO (https://www.who.int/csr/disease/swineflu/frequently_asked_questions/pandemic/en/)
Merriam Webster (https://www.merriam-webster.com/dictionary/pandemic)
MeSH: https://meshb.nlm.n…
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# Feature requests
**Purpose:** this is a place to easily log suggestions/feature requests. E.g:
* "I want to display XXX output as an option!"
* "I want to be able to combine database sketches…
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It would be interesting and useful to extract k-mers when reading assembly sequences (FASTA), and perform some simple dimensionality reduction (such as PCA) afterwards to build a meaningful scatter pl…
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Stuff like:
- [ ] difference between different strains of human virus and their effect on the virus (when known)
- [ ] difference between human and bat virus
- [ ] difference between sars-cov-2 a…
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MAFFT V7 https://mafft.cbrc.jp/alignment/software/tips.html
Download from NCBI with Batch https://astrobiomike.github.io/bash/ncbi_eutils
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Title: A synthetic consensus anti–spike protein DNA vaccine induces protective immunity against Middle East respiratory syndrome coronavirus in nonhuman primates
## Please paste a link to the p…
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Title: A pan-coronavirus fusion inhibitor targeting the HR1 domain of human coronavirus spike
## Please paste a link to the paper or a citation here:
Link: https://doi.org/10.1126/sciadv.aav…