-
**Submitting author:** @kokitsuyuzaki (Koki Tsuyuzaki)
**Repository:** https://github.com/rikenbit/nnTensor
**Branch with paper.md** (empty if default branch):
**Version:** v1.1.14
**Editor:** @prash…
-
### [REQUIRED] Describe your environment
* Operating System version: iOS 11.2 via React Native
* Firebase SDK version: firebase@4.11.0
* Firebase Product: storage
### [REQU…
-
Sat Apr 9 02:30:50 CST 2022 Total intact LTR-RTs found: 5470
Total intact non-TGCA LTR-RTs found: 21
Sat Apr 9 02:30:55 CST 2022 Start to annotate whole-genome LTR-RTs...
Use -noanno if…
-
I've implemented expandable `WebView` that always fits contents size. This would allow me to place it inside `CustomScrollView`, disable its gestures and most important place any other widgets below `…
-
Dear Dr. Shu Jun Ou,
I have predicted the Copia, Gypsy, and Unknown. However, when I tried to map the identified repeats alongwith cds using RIdeogram for 50Kb size, repeats show very less …
-
Hi Shujun,
First thank you very much for EDTA!
I have been using EDTA to identify TEs in a set of fungal genomes. I am using a self-made singularity container for this because I am running this…
reslp updated
3 years ago
-
Hello,
I'm running LTR retriever v2.9.0 (installed via conda), and based on the logs I'm expecting to see these output files in my working directory:
```
LTR-RT library
RC-genome-V4.500p…
-
Hi Shujun,
I've completed by LTRharvest run, and close to completing the LTR_FINDER run as well.
In terms of solo LTR discovery and reporting, of all the Perl scripts listed under LTR_retriever/…
-
Hi Shujun,
I am getting the following error:
ERROR: No such file or directory at /usr/local/apps/eb/LTR_retriever/1.6-foss-2016b/bin/output_by_list.pl line 35.
The simplified command that I am u…
-
Hi,
I've been having some trouble running LTR_retriever on my genome. I get the error noted below hundreds of thousands of times in my log, and no LTRs end up being identified.
>
Thu Jul 13 17:37…