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idr0013-neumann-mitocheck
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idr0026-weigelin-immunotherapy
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## Background
Raw forms of MSI data in imzML are perfectly appropriate and should be served. But preprocessed forms can also be useful. There may be a large knowledge gap for someone coming from, let…
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https://github.com/IDR/idr0016-wawer-bioactivecompoundprofiling
Sample plate conversion failed with:
```
(base) [dlindner@pilot-zarr2-dev idr0016]$ time /home/dlindner/bioformats2raw/bin/bioforma…
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idr0004-thorpe-rad52
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@ThomasMicroscopy
> Also, how to deal with memory issues. A plate dataset can be quite large, more than RAM. For example, a 384 well plate, with 3x3 sites, and 3 wavelengths, is already >10'000 pic…
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Hello to the SOPA creators.
I am quite a beginner to Python and the Command Line Interface. I have attempted to run the Ready made Snakemake pipeline for Xenium data (with the Baysor cell segmentat…
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idr0090-ashdown-malaria
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The issue is decribed here:
https://forum.image.sc/t/ngff-converter-1-1-4-fails-to-convert-czi-file-which-open-normally-in-fiji/78408?u=sebi06
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Hi all,
I just tried to convert a CZI fil…
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see: https://pypi.org/project/bfio/