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glencoesoftware
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bioformats2raw
Bio-Formats image file format to raw format converter
GNU General Public License v2.0
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Add `--no-tiles` option to write metadata only
#259
melissalinkert
opened
1 day ago
0
MRXS: conversion is incorrect when multiple pyramids are present
#258
melissalinkert
opened
1 week ago
0
Fix `--fill-value` to use setFillColor(...) API
#257
melissalinkert
opened
1 week ago
0
Add Phenix INI file support
#256
melissalinkert
closed
1 day ago
0
MCD: calculate channel count based on metadata, not pixel bytes
#255
melissalinkert
closed
1 month ago
0
Compression levels seem to have no effect on output file
#254
FelipeMoser
closed
1 month ago
3
Update to Bio-Formats 7.3.1
#253
melissalinkert
closed
2 months ago
0
Document and fail fast if tmp directory is noexec
#252
melissalinkert
opened
4 months ago
3
Add "--no-original-metadata" option to omit original metadata from METADATA.ome.xml
#251
melissalinkert
closed
4 months ago
2
Add -no-sas option as exists in bfconvert
#250
dsudar
closed
4 months ago
1
Look at performance of writing to s3
#249
melissalinkert
opened
4 months ago
0
Update to Bio-Formats 7.3.0
#248
melissalinkert
closed
5 months ago
0
Fix a couple of compile warnings
#247
melissalinkert
closed
4 months ago
1
Add artifact publication step to GitHub workflow
#246
sbesson
closed
5 months ago
0
Add Java 21 to the CI build matrix
#245
sbesson
closed
5 months ago
0
Conversion problem for the 4th channel
#244
Portglass
opened
6 months ago
3
Docker containers for new releases
#243
krokicki
closed
6 months ago
4
Metaxpress: get the correct number of planes for each series
#242
melissalinkert
closed
6 months ago
0
Update to Bio-Formats 7.2.0
#241
melissalinkert
closed
7 months ago
0
Clarify that .*.bfmemo files won't always be created
#240
melissalinkert
closed
8 months ago
0
Better fix for illegal access warnings
#239
melissalinkert
opened
8 months ago
0
Memo directory setting not being applied properly
#238
DavidStirling
closed
8 months ago
2
update Dockerfile
#237
bgruening
closed
8 months ago
3
How TIFF stack To OME-zarr
#236
Iamlearn
opened
8 months ago
2
Add notes on `--downsample-type`
#235
melissalinkert
closed
8 months ago
0
Fix progress and help options
#234
melissalinkert
closed
8 months ago
2
Move logging configuration to beginning of call() method
#233
melissalinkert
closed
8 months ago
2
Update to Bio-Formats 7.1.0
#232
melissalinkert
closed
9 months ago
0
Bump logback to 1.3.14
#231
melissalinkert
closed
10 months ago
0
Add getter for ThreadPoolExecutor
#230
melissalinkert
closed
10 months ago
2
Bump logback to version 1.3.13
#229
sbesson
closed
10 months ago
0
Update to Bio-Formats 7.0.1
#228
melissalinkert
closed
10 months ago
0
Add GPL license metadata to published POM
#227
sbesson
closed
10 months ago
0
Update setters to accept default values
#226
melissalinkert
closed
10 months ago
0
Topic addition: "ome-zarr-converters"
#225
joshmoore
closed
10 months ago
2
RFE: omit series directory if unneeded
#224
joshmoore
opened
11 months ago
0
Allow BioTek plates to be split across multiple subdirectories
#223
melissalinkert
opened
11 months ago
0
Add documentation for OpenCV to README
#222
perlman
closed
11 months ago
2
Update progress listener API to provide tile counts at each start notification
#221
melissalinkert
closed
10 months ago
1
Add variants of all options with underscore
#220
sbesson
closed
11 months ago
0
Add reset methods for each option
#219
melissalinkert
closed
10 months ago
7
Add Fluidigm Hyperion .mcd reader
#218
melissalinkert
closed
8 months ago
4
java.lang.NegativeArraySizeException with large tiff input with zip compression
#217
blowekamp
closed
2 months ago
4
Add a separate README section describing each of the additional readers
#216
melissalinkert
closed
11 months ago
0
RGB support
#215
melissalinkert
opened
1 year ago
1
Better documentation for BioTek
#214
melissalinkert
closed
11 months ago
0
Add support for INI files representing a Metaxpress plate
#213
melissalinkert
closed
8 months ago
0
Update opencv to 4.7.0-0
#212
melissalinkert
closed
11 months ago
2
Update to Bio-Formats 7.0.0
#211
melissalinkert
closed
1 year ago
0
Please bump OpenCV for ARM support
#210
CGDogan
closed
11 months ago
0
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