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**Is your feature request related to a problem? Please describe.**
I have some data that have a bad mass calibration but still need to use it for analysis. For full transparency in publication and p…
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### Description of feature
Currently, @timosachsenberg @jpfeuffer comet only support 'Asp-N,Chymotrypsin,CNBr,no cleavage,unspecific cleavage,Trypsin,Arg-C,Lys-C,Lys-N,PepsinA,Trypsin/P,glutamyl endo…
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Hi,
The following message was found when generated a spectrum library using DDA data. Please help
Thanks
Traceback (most recent call last):
File "C:\ProgramData\Python_3.9\Scripts\easypqp-scri…
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## Bug report
(Please follow this template replacing the text between parentheses with the requested information)
### Expected behavior and actual behavior
When running a pipeline (in this i…
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There are multiple issues with `~/.OpenMS/OpenMS.ini`
1. it is not well suited for a cluster / multithreaded environment where multiple threads or nodes want to write to it
2. there is currently n…
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This seems like it has been an issue for many years. The Agilent scan id numbers are large non-sequential numbers so using the MSConvert scan number filter doesn't work. The OpenMS FileConverter utili…
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Target date: 2nd week of November, 2023
Yesterday I told @cbielow that I would volunteer to be the release manager for the next release
https://github.com/OpenMS/OpenMS/wiki/Preparation-of-a-new…
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All seem to be at 2.6 .. latest is 2.8.
xref https://github.com/usegalaxy-eu/usegalaxy-eu-tools/issues/339?
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Release preparation instructions from: https://github.com/OpenMS/OpenMS/wiki/Preparation-of-a-new-OpenMS-release#release_manager
- [ ] Preparing the release candidate
- [x] Check all the issues…
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see e.g. https://github.com/OpenMS/OpenMS/commit/4e41abd4a49052549aa9f4547fb8ed1bd534b14d
Where `in_` would lead to invalid target errors.
This needs to be done in all "*.pyx" files in the OpenMS/…