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Hello Benjamin!
Thank you so much for this wonderful package and your incredible work. I have benefited a lot from your package and appreciate the time and effort you put into it. I've been running…
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When re-simulating residuals for fixed data and integer responses, p-values may spread within a certain range, due to the randomization procedure to smoothen out the integer values.
This phenomeno…
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1. Fix "< 325" into something better
2. Develop some sort of sorting arrangement for all the p-values less than -325 - e.g. by the size of the overlap.
3. Change "p-value" into "adj,p"
4. Add Fisher…
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Hi Ewen,
Thanks for creating this package - it's been very helpful! I had a small quality of life improvement for the or_plot() table which removes the leading zeroes in the _p_ value. This would b…
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Hi,
I'm trying to obtain the pvalue of the host prediction working in linux but I'm not sure how to do it
I have my phages of interest (PI), potential hosts (H) and a group of phages that I'm su…
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Can I set more than one P value?
I saw the "cut" argument but I couldn't set more than one value
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Need to check this in case there was an error in conversion.
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Hey @elswob @mcgml do you know what happens when a p-value is '0' in the original dataset?
It looks to me like they are converted to a -log10 value of 999: https://github.com/MRCIEU/gwas2vcf/blame…
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How to get chart with P-Values.
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### Contact Details
_No response_
### Bug
It seems an update to Infer package makes the following code obsolete. If so, the tutorial is much worth an update.
gender_discrimination_perm |>
vis…