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Setup up a task, based on https://github.com/galaxyproject/galaxy/blob/dev/scripts/api/library_upload_from_import_dir.py that is set to run every x (60?) seconds, that scans a directory, like /opt/gal…
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Planemo machine used to include Codebox - which was a huge pain and didn't work well and is now a dead project ... ... but bundling a Web IDE would make tool development could make the Cloud image pro…
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Dear all,
I tried with planemo (0.62) on Ubuntu 16.04LTS, Python 2.7.12, pip 19.2.3. I followed the quick start instruction by installing planemo, creating a demo directory "mytools", then entered …
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I've not updated anything on the (Test) ToolShed for a while, so I don't know when this changed but:
```
$ uname
Darwin
$ planemo --version
planemo, version 0.33.0.dev0
$ planemo shed_update -t testt…
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Like #724, but the circumstantial evidence points are a different root cause:
See the following TravisCI tests from the same tool commit https://github.com/peterjc/galaxy_blast/commit/3095f1909c6d8…
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In a planemo test I see 1000s of messages like
```
INFO: 127.0.0.1:36182 - "GET /api/jobs/5729865256bc2525 HTTP/1.1" 200 OK
2021-01-18 11:32:46,700 DEBUG [urllib3.connectionpool] http://127.0…
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Hi everyone,
I have an issue related to both the Qiime wrappers on the tools-iuc repo and to the Qiime Bioconda recipe (or rather one of its dependencies) so I'm not sure if this is the appropriate…
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I'm using planemo to test some workflow on a galaxy instance.
I have no problems on a certified site (SSL certificate) but when I'm trying on a self-signed certified url, I'm having this error:
`re…
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After installing reticulate, I see the following error when R launches (curiously, in RStudio, but not command-line R):
```
Error in normalizePath(conda, winslash = "/", mustWork = TRUE) :
pat…