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Dear BFEE2 team,
I am using BFEE2 to determine the binding energy between two large proteins (~150 amino acids for the ‘ligand’ and ~400 amino acids for the ‘protein’, respectively). I am using the…
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Does this tool work for a protein complex?
I have a structure for a heterodimer, but should the submitted sequence include both components?
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Hi team,
First of all thank you for making this wonderful program public. I was testing out the program today for the protein part of DiG and followed with 1 of the 6 provided examples. I have two …
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Dear all,
The proposal has been made to obsolete:
GO:0015680 protein maturation by copper ion transfer
GO:0097428 protein maturation by iron-sulfur cluster transfer
GO:0110147 protein maturatio…
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Hi all,
I had a quick question regarding how the calculation of protein coverage is performed in the `protein.tsv` report. I was trying to compute protein coverage by using the results that are in …
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Nice job you have done! I noticed in your article that you have done some work on protein property prediction. Could you please upload the code for this kind of task, or give me some advice on how to …
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Using the UniProt API we can download data for displaying in the protein feature viewer. Like we did for PomBase: pombase/pombase-chado#52
I've downloaded a japonicus data file and added to SVN fo…
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Hello and congrats again to the Baker lab for the well-deserved Nobel Prize!
I'm trying to achieve the functionality of RFDiffusion+ProteinMPNN with Protein Generator. I have tested on three system…
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mitochondria large subunit
Systematic ID | Gene name | Product description | Budding yeast orthologs | Human orthologs
-- | -- | -- | -- | --
SPAC1610.02c | mrpl1 | mitochondrial ribosomal prot…