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Hello,
I'm analysing single-cell full-length RNA sequencing data. I would like to perform an analysis on alternative splicing exons, which has been mentioned multiple times in your research group's…
weib3 updated
2 weeks ago
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_From @olgabot on July 6, 2014 22:55_
Hi @jbenet and @maxogden! Thank you so much for the time you took to meet with @mlovci and me this weekend. Here's an overview of our current data management sit…
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Hi,
I wanted gene ontology analysis for marchantia genome RNA Seq data can I use this script for my analysis as blast2go is paid is there any issues will be there please help me.
Thank you
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# General Notes
This repository serves as a mostly automa…
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Hi,
I have some some bulk ATAC and RNA seq in which I wanted to identify some DORCs. Is it possible to use the dorc function in this kind os data (ie importing my bulk rds into the objects)? Of cour…
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![rna_pc1_pc2_control_treated](https://cloud.githubusercontent.com/assets/5261545/25207366/e3f322c6-2522-11e7-9d50-5a27b00b73b0.png)
![rna_pc1_pc3_time](https://cloud.githubusercontent.com/assets/526…
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Hey, I am trying to do allele-specific expression analysis (ASE) for a few RNA seq samples ( 32 disease and 5 normal samples, unpaired unrelated). Could you suggest a pipeline/method to convert the ma…
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Hi,
I am trying to run celescope. I built the reference genome and I have created the shell scripts, but I obtain this error:
sh Bnsortednuclei1.sh
2024-05-14 14:13:14,148 - celescope.tools.…
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Hello,
I'm getting an error when trying to run croo after a successful run of the encode rna-seq-pipeline. My version of croo is 0.6.0
The command I ran is
`croo /storage/aadams/scripts/encode…