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Hello!
We are attempting to use FRASER on a cohort of 400 samples. We've been experiencing issues completing FRASER when sending the job to our sge queue, even when providing 1.5TB of memory. It se…
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Hello,
I used your x64 public AMI, and during the installation it is stucking in "Installing Sun Grid Engine..."
Here is my log
starcluster start physicscluster
StarCluster - (http://star.mit.edu/c…
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Hi Sigve,
How could I run cacao on the SGE cluster without Docker support?
Regards,
Ya
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Hi, I'm trying to run a SE xtb job using pyGSM. I have used GSM for several years and am switching to pyGSM.
In addition to the SGE stuff required for my submit script, I am using:
gsm -xyzfile …
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I've seen this error reported every so often on the mailing list, but couldn't find an issue on it:
> An error occurred setting the metadata for this dataset
> Set it manually or retry auto-detect…
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https://help.galaxyproject.org/t/drmaa-library-threads-and-munge-invalid-credential-format/
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Hello SGE maintainers,
I am reaching out to discuss an issue I've encountered regarding the scalability of SGE, particularly when expanding the number of nodes in a cluster. My experience has been …
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Hi! I would like to report this load balancing error. It causes some nodes to be kept alive without jobs.
Thank you!
Stack trace:
Execution hosts: 7
Queued jobs: 0
Avg job duration: 345 secs
Avg jo…
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Hello,
I've been trying to upgrade my pyABC scripts from a parallel to a distributed execution of simulations and I've failed to do so for the moment. Since I will execute my script in a cluster th…
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**Background**
Currently, grid engine autoscaler allows automated scaling of sge #298 and slurm #3330 clusters. Nevertheless, scaling of kubernetes clusters is not supported yet.
**Approach**
…