-
Working in a notebook or REPL with vivarium simulations is pretty unpleasant. The logging level is set to `DEBUG` by default, which throws a bunch of not very helpful information at the user. It's a…
-
I have just gone through this update and the loss of efficiency for me is probably 10-15%. I want to stick with Wayland but going through all the hoops to restore the efficiency I had under XFCE4 is …
-
- [x] https://github.com/simularium/vivarium-models/issues/19
- [x] https://github.com/simularium/simulariumio/issues/63
- [x] https://github.com/simularium/vivarium-models/issues/18
- [x] https://…
-
While working on the wlroots-based compositor https://github.com/inclement/vivarium I was having bemenu-run crash occasionally with the message:
wayland: mmap failed
This seems to be because…
-
Vivarium raises a very annoying error, e.g.
```vivarium.framework.population.exceptions.PopulationError: A component is corrupting the population table by modifying the dtype of the low_income colu…
-
Vivarium needs config options (accessible via viv_config.h and config.toml) for configuring output rotation, dpi etc.
-
Views in non-visible workspaces don't have their coordinates updated, so damage to those views still damages each output even if what's actually displayed there has not changed.
This should be simp…
-
Python 3.10 deprecates `distutils`. It'll be removed in Python 3.12.
So with the move to support Python 3.10 in #135 , we should replace distutils in all vivarium projects. `setuptools` embeds a fo…
-
adding continuous noise into MINOS for continuous variables. This can be done simply by adding noise from numpy.random functions using some variance (e.g. 10 for SF12).
However is seems a good ide…
-
I tried to install and when I run the ```ninja -C build``` Command, I get this error message:
I don't really know what it means, so help would be appreciated
```
ninja: Entering directory `build'…