issues
search
vivarium-collective
/
vivarium-core
Core Interface and Engine for Vivarium
https://vivarium-core.readthedocs.io/
Apache License 2.0
23
stars
2
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
fix Quantity import
#240
eagmon
closed
5 months ago
0
python 3.12
#239
eagmon
closed
5 months ago
0
correct emit_time for the global_time_precision
#238
eagmon
closed
7 months ago
0
Add tests for MongoDB and fix bugs
#237
thalassemia
closed
7 months ago
1
Add data key to breakdown documents if missing
#236
thalassemia
closed
8 months ago
3
Publish v1.6.1
#235
thalassemia
closed
10 months ago
1
Recursively compare schemas during validation
#234
thalassemia
closed
1 year ago
0
Emitter bug fixes
#233
thalassemia
closed
1 year ago
0
v1.6.0
#232
thalassemia
closed
1 year ago
1
Update networkx error msg for already deleted Step
#231
thalassemia
closed
1 year ago
0
expanded _move target to support tuples going through port to sub-store
#230
eagmon
closed
1 year ago
0
Move update allows state updates
#229
eagmon
closed
1 year ago
0
Schema validation fails with Numpy arrays
#228
thalassemia
closed
1 year ago
0
Make Process.default_state recursive
#227
thalassemia
closed
1 year ago
1
support python 3.11
#226
eagmon
closed
1 year ago
10
import registries from registry module to fix bug
#225
eagmon
closed
1 year ago
0
Hierarchy division test
#224
eagmon
closed
1 year ago
0
update pint imports for 0.20.1
#223
eagmon
closed
1 year ago
0
Breakdown fixes
#222
thalassemia
closed
1 year ago
0
Allow breakdown document to lack data key
#221
thalassemia
closed
1 year ago
0
Recalculate hashes for comparison of Units
#220
thalassemia
closed
1 year ago
0
Parallel queries
#219
thalassemia
closed
1 year ago
0
Create new MongoClient per OS process
#218
thalassemia
closed
2 years ago
0
Create Mongo index for simulation time
#217
thalassemia
closed
2 years ago
0
Add orjson to install requirements
#216
thalassemia
closed
2 years ago
0
Serialization fixes
#215
thalassemia
closed
2 years ago
2
Optimize dictionary key removal
#214
thalassemia
closed
2 years ago
0
Clean up documentation
#213
thalassemia
closed
2 years ago
0
Make TimelineProcess a Step
#212
thalassemia
closed
2 years ago
1
Fix memory leak and parallel process division
#211
thalassemia
closed
2 years ago
1
External Controls for Dealing with Conflicting Updaters
#210
WilliamIX
opened
2 years ago
0
Handling Multi-Updates
#209
thalassemia
opened
2 years ago
0
Update CHANGELOG.md
#208
thalassemia
closed
2 years ago
0
Handle lists of Quantities in `Store.apply_update`
#207
U8NWXD
closed
2 years ago
1
Support multiple emits for the same timestep
#206
U8NWXD
closed
2 years ago
1
Prevent multi-updates in initial_state
#205
thalassemia
closed
2 years ago
0
Optimize Serialization Using BSON C Extensions
#204
thalassemia
closed
2 years ago
4
More comprehensive Store.sources
#203
U8NWXD
closed
2 years ago
0
Allow passing additional filters to data_from_database
#202
U8NWXD
closed
2 years ago
0
Add initial_state to composition.py Engine keys
#201
U8NWXD
closed
2 years ago
0
Deterministic step execution order within layers
#200
U8NWXD
closed
2 years ago
0
Removing dtypes from serialize.py that are not available on several platforms
#199
cyrus-bio
closed
2 years ago
2
Process Commands
#198
U8NWXD
closed
2 years ago
0
Proposal: Improved Handling of Parallel Processes
#197
U8NWXD
opened
2 years ago
3
serialize.py: np.float128 and np.complex256 are not implemented on some platforms
#196
cyrus-bio
closed
2 years ago
5
Replace GoReleaser for Installing Vale
#195
U8NWXD
closed
2 years ago
0
Proposal: Multiple Production Branches
#194
U8NWXD
opened
2 years ago
0
Engine(Process)
#193
prismofeverything
closed
2 years ago
6
remove composition.py
#192
eagmon
closed
2 years ago
4
don't use timestep for quiet paths
#191
prismofeverything
closed
2 years ago
0
Next