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Hi,
I am trying to run arcs on an anopheles genome (300Mbp size), but the graph I get is empty:
graph G {
}
I was hoping you could help me understand what am I doing wrong, or how I can tweak the …
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Currently nothing happens when a user flags an observation. Let's create a notification to be sent to admins when an observation is flagged.
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This is a preference question for @mestato
http://160.36.205.61:8095/organism/Castanea/mollissima?tripal_pane=group_transcriptome
![screen shot 2018-05-09 at 11 35 25 am](https://user-images.…
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The user provided me with shared, constaxonomy and mothur created biom file. The file looked "weird" to him, more like a tree structure.
Response:
The make.biom command is designed to convert a sha…
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Hi Tripal folks,
We have created a custom module that allows users to submit metadata and data to our Tripal site. We have recently extended this module to ingest metadata from NCBI for genome ass…
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For a feature, the first sequence is labeled "Sequence", change to "Type-ID Sequence" e.g. "mRNA contig Sequence" or "mRNA Sequence"
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Working with Kristian Stevens to upload new walnut genome resources.
NCBI:
SubmissionID: SUB3840195
BioProject ID: PRJNA445704
WIKI WRITEUP OF DATA PROCESSING ETC
https…
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Is there a way to get NanoFilt to work without using a zipped file?
Thanks.
Novis John
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We want to set up a galaxy workflow that will let undergrads add our blast/interpro annotations to data allowing it to be loaded.
Someone needs to convert the command line workflow to galaxy.
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vcf currently flags deletions as '\*', which when read into vcfR2DNAbin is converted to 'NA'. We would generally expect a deletion to be represented by a '-' intead of 'NA'.
``` r
library("vcfR…