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Hi Team,
getting issue with fetching the file from tcga repository https://portal.gdc.cancer.gov/repository?facetTab=files
inline below is the error log from jupyter notebook for your reference
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https://mp.weixin.qq.com/s/9FQcagelA7H3Bw8UNmnDyA
ixxmu updated
2 years ago
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1. Go to the collab test environment, and upload variants for `HCM-BROD-0002-C71` (http://hcmi.cancercollaboratory.org/admin/model/HCM-BROD-0002-C71). You will see the multiple MAF error:
![image](…
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Hi! Recently I have tried another way, downloading a WSI directly from a website and place it into the ./data folder, to replace the gdc tools to get WSIs. But I am facing a new problem. Could you ple…
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**Describe the bug**
For Aperio svs files, I run into a cryptic error:
```/slide.svs: Compression scheme 33003 tile decoding is not implemented.```
However, cuCMI still loads a tile and doesn…
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#### What are the scientific goals of the analysis?
Prepare TARGET RNA and WES and WGS data for ingestion into Open Targets Platform
#### What methods do you plan to use to accomplish the sc…
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Go to the page https://portal.kidsfirstdrc.org/participant/PT_F822DBA0#summary
and look at the section Available Data Files. The display is very bad and we want to improve it. We will do like in the G…
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Can you please provide the data files like `combined2.pkl` and the data split indexes `data_split_idx` used in your notebooks?
```
data_split_idx_folder = f'{result_folder}/data_split_idx'
if not…
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#### What are the scientific goals of the analysis?
To determine whether these three datasets, while all polyA, need batch correction by dataset.
#### What methods do you plan to use to acco…
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The Microsoft Project Acoustics team is excited to share a new update with you.
We’d like to announce Project Acoustics version v1.1 with plugin support for Unity and Unreal+Wwise. This update inco…