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Hi,
can you point me to where the MBARC error profile for ART is coming from? I could not find any information on that.
In any way, I think it introduces way to high error rates that are more co…
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Used for the carnet + metabarcoding manuscript - check and reuse code for this calculation.
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Kia ora GJ - more of a comment than a question, but in labs I've come through it has been pretty common practice to trim the primer sequence off the fragments of interest, because you are mostly seque…
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**change title of case study 'eDNA barcoding'**
The title of the case study 'eDNA barcoding' should be 'eDNA metabarcoding' since the case study refers to complex, multispecies samples proces…
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Dear Deni,
thank you for developing this tool. We have used it to analyse a dataset but were quite surprised to see so little difference between healty and diseased samples. I am new to 16S metabarco…
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Zemb O, Achard CS, Hamelin J, De Almeida M, Gabinaud B, Cauquil L, Verschuren LMG, Godon J. 2020. Absolute quantitation of microbes using 16S rRNA gene metabarcoding: A rapid normalization of relative…
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Materials ingested into TeSS from Zenodo lose their formatting. The descriptions are provided through the Zenodo API, formatted with HTML tags.
TeSS needs to convert this to markdown for it to dis…
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I've been trying to run a subset of the R code in ``hemiptera_metabarcoding.Rmd`` sufficient to regenerate Figure 3. This has required assorted ``library(...)`` calls and also running the "R Assign Ta…
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I am trying to run the R code provide in ``hemiptera_metabarcoding.Rmd`` using ``knitr`` to extract it as an R script, and run it:
```
$ git clone https://github.com/alexpiper/HemipteraMetabarcodi…
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Hey Dominic,
First: BOLDIGGER is truly a great tool. We do a lot of insect metabarcoding at the moment and wouldn't get such high quality results without your it, so thank so much for constructing …