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Is there an install guide for Calypso available? We have a OMOP instance at Colorado Children's Hospital and would like to see if we can install Calypso on top.
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So that the cohort table satisfies omop cdm cohort requirements we drop records that start outside of an observation period. It would be nice, I think, if we printed a cli message telling the user how…
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This is a placeholder, so a proposal could be worked out:
Instead of the free text sig field (which may even be in a non-English language), we need to have the actual frequency information. So, 2 m…
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When using concept ancestor table to find lowest level common ancestor of these concept_ids (37024736,37027780,37033687,37045756,37052213,37068907,37077746), the lowest level common ancestors found we…
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I looked into the implementation of the era tables and used the scripts Ohdsi defined online: https://ohdsi.github.io/CommonDataModel/sqlScripts.html#Era_Tables
However, when I ran the etl (e.g. ria…
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**TLDR**: Get example OMOP data to map it with RAMSES data model
**Background**: Ramses's Data model has a particular focus which is different from that of the OMOP data. We need some example OMOP da…
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# Where and how to store Suspected Diagnosis in OMOP CDM
## CDM or THEMIS convention?
THEMIS
## Table or Field level?
Table
## Is this a general convention?
No
## Summary of issues
1. Where and ho…
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title - see above
requester: see the user who posted it
Discussion: http://forums.ohdsi.org/t/omop-cdm-and-clinical-trials/2109
This proposal does not add any new table.
It only adds a convent…
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OMOP currently captures visits. Where a patient AND provider interact.
If a patient logs into PHR or provider mails a letter to the patient, it is a one sided event. Just patient does something or …
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I'm working on a study where I have several concept sets that need to be included in characterization.
These concept set expressions include some concepts in the regimen domain which is causing a …