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per @ccbaumler https://github.com/sourmash-bio/sourmash/pull/2222#discussion_r949418693 we don't actually document max containment anywhere 😱
I can't think of a particularly good place to put it,…
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You can reach many of the sourmash developers over at [the new sourmash-bio community gitter channel](https://gitter.im/sourmash-bio/community) - hope to see you there!
You can come ask for help us…
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'twould be nice to have the threshold at which matches were generated output from `sourmash gather`.
https://github.com/sourmash-bio/sourmash/issues/1818 also involves adjusting sourmash gather ou…
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I have run sourmash compare on 2683 signature files each corresponding to a single bin from a large metagenomic dataset. When I then try to plot the output using sourmash plot --labels cmp, I get the …
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I want to sketch a genome to get 7-mers of amino-acids (ie peptides), so I give the new CLI a spin:
```bash
sourmash sketch translate -p k=7,k=10,scaled=1000,dayhoff genome.fasta
```
However, …
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with sourmash! https://github.com/sourmash-bio/sourmash/issues/2638
using kmcp! https://github.com/shenwei356/kmcp/issues/32
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Goal: Benchmark 'sourmash --track-abundance' to determine if the relative abundances reflect true abundances using a synthetic dataset with defined abundances.
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Large kmers help to sort out strain variants thus using a k of 51 with sourmash or kraken may be the best way to go.
### Expected behavior
### Actual behavior
### Steps to reproduce the …
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I installed `charcoal` by the book and tried to run the demo as documented in the README. Alas!
```python
python -m charcoal run demo/demo.conf -j 4
** read 2 provided lineages
** config file ch…