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hi ,
while running spm_fmri_auditory data,
realign , coregister are working fine.
but when it reaches segementation it throws "cannot import name NUMPY_MMAP".
thank u.
P.S: here is the con…
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At least the following examples contain absolute paths:
```
nipy_glm_fsl_feeds_fmri.py
openfmri_preproc.py
purepython_preproc_demo.py
realign_demos.py
coreg_demos.py
```
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We need an `attach_rest_preprocessing` function for:
https://github.com/Neurita/pypes/blob/master/pypes%2Fdatasets.py#L38
This workflow should do the basic preprocessing of resting state fMRI data.
T…
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Why this design choice when the default is middle?
preproc = create_featreg_preproc(whichvol='first')
def create_featreg_preproc(name='featpreproc', highpass=True, whichvol='middle'):
https://g…
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- [ ] get fMRI registration working
- [ ] deliverables: QC metrics from below pipeline (NOTE: this pipe leaves out reorientation):
![image](https://cloud.githubusercontent.com/assets/8883547/1536666…
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Most of what I've been working on for my thesis has been so-called "encoding" models of electrode activity. This is quite similar to the decoding models already implemented in MNE, but where the outpu…
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illdopejake wrote:
It would be cool if there was a keyboard shortcut to Quit. (Maybe there is and I just don't know about it?)
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The openfmri/ and scripts/ subdirectories are probably broken. These should be cleaned up or perhaps simply deleted from the repo.
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opt_grab.filter.run is not selecting specified runs, but instead seems to be grabbing all runs.
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The synced version with the xyz coordinates prelisted, seems to misalign the template to structural image. This is not happening with the simpler (older) version of QC.