SIMEXP niak issues - Githubissues

SIMEXP / niak

GNU Octave library for connectivity analysis in large fMRI datasets

http://niak.simexp-lab.org

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issues

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add support for non-uniformity correction

#398 pbellec opened 2 years ago
0
Is motor fMRI data essential to the NIAK pipeline?

#397 Ya-Lin-Huang opened 3 years ago
1
Update PREPROCESSING.md

#396 HanadS opened 5 years ago
1
https online version of the doc is not working

#395 bpinsard closed 4 years ago
5
replace the bids parser by a call to pybids

#394 pbellec opened 5 years ago
0
better bids-app and boutique support

#393 pbellec opened 5 years ago
0
test that niak does not leave files in the tmp

#392 pbellec opened 5 years ago
1
niak clogs /tmp and kills the OS

#391 bpinsard opened 5 years ago
4
if the fieldname of files_in structure is too long psom throws an error saying the structure does not exist

#390 HanadS closed 5 years ago
1
NIAK throws an error saying it can't find an image but still tries to preprocess image

#389 HanadS opened 5 years ago
0
qc_motion report crashing for erroneous subjects

#388 HanadS opened 5 years ago
0
crash using compcor

#387 pbellec opened 5 years ago
0
running NIAK singularity with slurm system

#386 yasharz closed 5 years ago
3
most of octave svds tests fails ( niak-cog docker)

#385 MontrealSergiy closed 5 years ago
3
missing parameter `nb_vol_min` in the doc of `niak_brick_regress_confounds`

#384 pbellec opened 5 years ago
0
verbose broken in `niak_brick_regress_confounds`

#383 pbellec opened 5 years ago
0
regress_confounds failure

#382 nooralsh closed 5 years ago
6
Fixed bug if hdr.extra.time_frames was missing

#381 ycollinv closed 6 years ago
0
niak_brick_anat2stereolin is not robust to spaces in the file name

#380 pbellec closed 5 years ago
0
Update Boutiques descriptor

#379 lalet closed 6 years ago
0
Updated Dockerfile to fix build failure

#378 lalet closed 6 years ago
0
NIAK ADHD-200 Data: Mean FD motion values

#377 amrithah closed 5 years ago
0
Errors running NIAK pre-processing pipeline

#376 amrithah closed 5 years ago
15
user can't download niak because it is too big

#375 pbellec closed 5 years ago
3
Slice timing correction from time list

#374 poquirion closed 5 years ago
2
spm crashes in recent containers

#373 pbellec closed 5 years ago
2
Daemon collector at 100%CPU

#372 poquirion opened 6 years ago
1
niak_gb_vars global variable error

#371 angela-tam closed 5 years ago
1
Circleci 2

#370 poquirion closed 7 years ago
0
make niak_test_all `splitable`

#369 poquirion closed 5 years ago
0
nu_correct error

#368 nooralsh closed 5 years ago
1
pipeline_GLM_connectome & nii vs mnc files

#367 perrineferre closed 7 years ago
1
nu_correct trying to process nii file directrly

#366 yassinebha opened 7 years ago
0
Test `.nii` files in `niak_test_all`

#365 poquirion closed 5 years ago
1
Devel

#364 poquirion closed 7 years ago
0
make a plot of the avg global sig to check for initial signal drop

#363 pbellec closed 5 years ago
1
create a list of papers using niak

#362 pbellec closed 5 years ago
0
Update niak_cmd to fit boutique descriptor

#361 poquirion closed 7 years ago
1
Make niak_write_nifti compatible with octave 64

#360 poquirion closed 7 years ago
1
pipe_parameters.mat not in black list for conectome pipeline.

#359 poquirion closed 7 years ago
1
support non-linear transform in `niak_read_vol` and `niak_write_vol`

#358 pbellec closed 5 years ago
0
add field inhomogeneity correction to fMRI preprocessing pipeline

#357 pbellec opened 7 years ago
1
Jobs crash after midnight singularity machine time

#356 yassinebha closed 7 years ago
1
escape spaces in file names

#355 pbellec closed 5 years ago
0
Issue351

#354 pbellec closed 7 years ago
0
negative correlation artefacts in r-maps

#353 pbellec closed 5 years ago
0
Fixed a bug in the network list for the connectome report.

#352 pbellec closed 7 years ago
1
missing listNetwork.js in the connectome report

#351 pbellec closed 7 years ago
1
version tag is broken on niak 1.0

#350 pbellec closed 7 years ago
2
multiple T1 alignement and averaging in the preprocessing pipeline

#349 pbellec closed 5 years ago
0