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Hello,
We have an amplicon dataset from a NovaSeq run and are exploring how we might alter settings in the dada2 pipeline to effectively identify errors in our data. In case you are unfamiliar, No…
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so (some days later and some updates in comparison to #129):
```
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_ _ _(_)_ | A fresh approach to technical computing
(_) | (_) (_) | Documentation: https…
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When I run the code cells to plot in Jupyter, all plots are displayed correctly in my .ipynb file. Then I got the following issues:
1. If I reopen the .ipynb file, all plots become texts, instead of …
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In SymPy.jl v1.2.1, iszero(x::Sym) returns false. In v2.0.1, it throws `ERROR: KeyError: key :boolalg not found`.
```julia
using SymPy
@syms x
iszero(x) # returns false in v1, but errors in v2
`…
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Repo: serenity4/XKeyboard.jl
Run URL: https://github.com/serenity4/XKeyboard.jl/actions/runs/10538871797
Image ID: sha256:2f5eb2b6ca4ba43377bf5c99f95152b3b4c8e82f6ed1f8734f171c7d3d787fb4
Stacktrace:
`…
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The preferred methods in some other assessments. Would be good to include in casal2 at a later date or as the need arises
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Hello,
I have a dataset sequenced with Novaseq 6000 with 250PE for 77 libraries and four primers: 12S, COI, ITS and 18S, which gave ~1-6 million paired reads per library, with some lower exceptions…
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I use Jupiter Notebook for squidgy nanoString analysis, it works fine until I got the last comment I attached below. I also attached the error message after that. I tried several things as well as g…
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Dear team, thank you for your wonderful software RISC. It is great!
However, I run umap and find the clusters crowd together and overlap (pic in the attachment)
And the code below (scRNA is my Seura…