-
Dear all,
Inside the file called "info.txt" I found the following fusion candidate:
**ENSG00000118058 ENSG00000130396 21 KMT2A AFDN known,oncogene,chimerdb2,cgp,ticdb,tcga,cell_lines,chimerdb3kb…
-
-
https://mp.weixin.qq.com/s/fCDpzVRO80zD0Pe_gDlEcQ
ixxmu updated
2 years ago
-
#### What are the scientific goals of the analysis?
Run `fusion_filtering` module for `cohort == GMKF | CBTN | PNOC` and run project-specific filtering by `cancer_group` instead of `broad_histolo…
-
I have created the following hook called prettier which formats js files.
https://github.com/awebdeveloper/pre-commit-prettier/blob/master/.pre-commit-hooks.yaml
When i try to commit a file (say m…
-
Hi there,
Thanks for making this package & templates available. I've found a glitch unfortunately.
When parsing a bibliography using `bibliography_entries()` the function calls
`bib
smped updated
3 years ago
-
There are three synonyms for CRK in the [production target profile page](https://www.targetvalidation.org/target/ENSG00000167193) but none in the [alpha version of the rewrite](https://alpha.targetval…
-
Hello,
I am trying to run the following example program from the github main page:
```from pyate import combo_basic
# source: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1994795/
string = …
-
When are genes supposed to appear on a circos plot? Even for genes that appear in the linx 1.15 **.linx.driver.catalog.tsv file, and which fall completely within the genome coordinates shown in the p…
-
Hi，
Thanks for this great software. I've noticed that AmpliconArchitect annotates oncogenes in the amplicons. However, when we analyzed data, some tumor suppressor genes like "RB1","APC" etc are also…