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It looks like subsequent phenotype vectors are getting sent back to one user. For example, with 2 simultaneous requests, the first submission will receive the first AND second phenotype vectors. The s…
J0vid updated
3 years ago
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Currently there are a lot of mangement commands:
* compute_n_hits
* generate_complete_csv
* import_phenotypes
* import_publication_links
* import_sample_number
* index_study
* setup_es
* su…
timeu updated
7 years ago
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After talking with Judy Blake at ISMB, I think we have an agreement in principle that we should get more MGI data into Wikidata. Next step is to actually prototype a few of their records as Wikidata …
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We need to determine
* when counts for an abnormal finding? Still > 3 to be called having an HPO term? Maybe we should think about timeline more this time.
* how to define that a patient diagnos…
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Greetings all! We need classes for microbial lifestyles like "free-living", "biofilm-associated", "substrate-bound", and "host-associated" - these aren't exactly phenotypes (more the result of a combi…
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FLybase and SGD have more complex multi-term phenotypes that require special consideration in the modeling.
We need to plan and implement ingests for these.
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The article I came across that utilized MTAG left me feeling very puzzled about whether I used the MTAG is correct.
1. As per my understanding, if I were to employ MTAG to simultaneously input fo…
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I was able to get the C++ version compiled, but now I am seeing large discrepancies with the results compared to the python version. The problem seems to be with the C++ version. For example, here is …
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The Phenoscape KB allows querying for evolutionary phenotype profiles that share semantic similarity with the phenotypic profile of a query gene. These evolutionary phenotype profiles are assigned to …
hlapp updated
9 years ago
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{"results":[]}
For example clicking on download all results for this query: http://kb.phenoscape.org/#/entity/http://purl.obolibrary.org/obo/UBERON_2001226?tab=taxa&taxatab=phenotypes&genestab=phen…