microbialphenotypes OMP-ontology issues

microbialphenotypes / OMP-ontology

This repository contains the editors's working copy of OMP and public release files.

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issues

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Add license to the source files

#281 StroemPhi opened 1 year ago
1
Add obofoundry topic to repo metadata

#280 cthoyt opened 3 years ago
1
NTR: terms for acid tolerance response phenotype

#279 dsiegele opened 3 years ago
1
Need a standard for naming mutant strains from TnSeq experiments

#278 dsiegele opened 4 years ago
0
NTR: tolerance to antimicrobial agents

#277 dsiegele opened 4 years ago
2
NTR: absence of survival

#276 Gabrporter opened 4 years ago
0
NTR: Decreased Survival

#275 Gabrporter opened 4 years ago
0
NTR: Increased survival

#274 Gabrporter opened 4 years ago
0
NTR: Increased Tolerance to Daptomycin

#273 Gabrporter closed 4 years ago
1
NTR: Increased tolerance to Vancomycin

#272 Gabrporter closed 4 years ago
1
NTR: Increased tolerance to Rifamycin

#271 Gabrporter closed 4 years ago
1
NTR: terms for growth at different pH

#270 dsiegele opened 4 years ago
0
NTR: presence and absence of organic nitrogen source utilization

#269 dsiegele opened 5 years ago
1
NTR for cell population growth in the presence of nutrient limitation phenotypes

#268 dsiegele closed 5 years ago
1
NTR: terms to describe effect of temperature on population growth phenotypes

#267 dsiegele opened 5 years ago
0
NTR: make terms for presence/absence of growth at acid and alkaline pH

#266 dsiegele closed 5 years ago
2
Automate OMP annotations

#265 peterwu19881230 closed 5 years ago
4
Nitrogen utilization redirects to site-specific recombination

#264 peterwu19881230 closed 5 years ago
2
found chemical resistance phenotype terms that needed to be made obsolete

#263 dsiegele opened 5 years ago
0
NTR: colony morphology phenotypes for bacterial biofilms paper

#262 dsiegele opened 5 years ago
0
NTR phenotype terms to describe changes in coiling in spiral bacteria

#261 dsiegele opened 5 years ago
0
NTR: fruiting body morphology phenotypes

#260 dsiegele opened 5 years ago
0
check annotations to GO:0001896 - autolysis

#259 dsiegele closed 5 years ago
1
fix GO annotations for ygeR

#258 dsiegele closed 5 years ago
4
remove annotation of rpsO to GO:0006378

#257 dsiegele closed 5 years ago
2
fix annotations for the alternate serine pathway (Tut cycle)

#256 dsiegele closed 5 years ago
1
A few cases of <new synonym> in OBO file

#255 althonos closed 5 years ago
1
How to capture the host cell/tissue where a microbial phenotype occurs

#254 dsiegele opened 5 years ago
4
Remove placeholder dbxrefs in `omp-edit.obo`

#253 althonos closed 5 years ago
4
Does OMP need separate terms for population growth, cell population growth, and vegetative cell population growth?

#252 dsiegele opened 5 years ago
3
New term request: subclasses of survival in macrophage phenotypes

#251 dsiegele opened 5 years ago
2
NTR: resistance to nutrient limitation stress phenotype

#250 dsiegele opened 6 years ago
2
resistance to cold stress and heat stress phenotypes need editing

#249 dsiegele opened 6 years ago
4
Proposal to merge cell diameter and cell width terms

#248 dsiegele opened 6 years ago
2
Organization of terms that describe environmental effects on growth of a microbial population

#247 dsiegele opened 6 years ago
2
NTR: need terms for cell morphology phenotypes described in Campos et al.

#246 dsiegele opened 6 years ago
8
NTR: alkylating agent and chelator subclasses of chemical resistance phenotypes

#245 dsiegele opened 6 years ago
0
edit terms for 'nitrogen utilization phenotypes'

#244 dsiegele opened 6 years ago
0
sulfonamide antimicrobial agent or sulfonamide antibiotic?

#243 dsiegele opened 6 years ago
1
NTR: bile acid resistance phenotype

#242 dsiegele closed 5 years ago
1
NTR: surfactant resistance phenotypes

#241 dsiegele closed 5 years ago
0
NTR: metal resistance phenotypes

#240 dsiegele closed 5 years ago
1
NTR: BioLog phenotype data

#239 dsiegele opened 6 years ago
0
NTR: A22 antimicrobial agent resistance phenotype

#238 dsiegele closed 6 years ago
2
NTR: bicyclomycin antimicrobial agent resistance phenotype

#237 dsiegele closed 6 years ago
1
How to annotate Nichols' conflicting conditions?

#236 peterwu19881230 opened 6 years ago
2
Review cell population viability terms in OMP

#235 dsiegele opened 6 years ago
0
NTR: terms to describe germ tube morphologies

#234 dsiegele opened 6 years ago
0
Review terms for transport phenotypes

#233 dsiegele opened 6 years ago
0
High-level grouping terms should be added to the subset: "Term not to be used for direct manual annotation"

#232 dsiegele closed 6 years ago
1