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Subtask of #13754
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GO:0099614 protein targeting to spore cell wall
-> RENAME 'protein localization to spore cell wall'
-> 2 EXP annotations, consistent with that new label (ie whether the…
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Andy Crouse reported an issue where very un-pathway-like things are being returned when querying for `biolink:Pathway`s associated with a disease. See this query: https://arax.ncats.io/?r=41416
It …
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We currently use an algorithm to allow for a user to provide a sequence and then query the API for parts, cache the query, find all forward/reverse part sequences in the query sequence, and then use a…
vsoch updated
4 years ago
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I do not entirely understand what is happening, but in some cases CDSs with ribosomal slippage from NCBI cause `double free or corruption (!prev)`:
```
$ gffread --version
0.12.7
$ curl https://…
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I recently started using riboviz to analyze some published ribosome profiling data. It worked very well, thank you very much for all of your work! Running the program on the University of Chicago clus…
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CONSERVED UNKNOWN CHANGES
410
Although these were in "conserved unknown" they had an existing process annotation and so they were not in the Open Biology unknown list:
- [x] SPBC9B6.03 endosomal …
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When running the Analysis notebook with eukaryotic ribosome dataset, the following error message appears:
`ValueError Traceback (most recent call last)
Input In [6],…
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Hi Mike,
I am running riboviz nextflow pipeline on human ribose data (SE 50 bp ~1.8 gb). The "generateStatsFigs" process is taking too long (2 days and still running), is it because of R?
Then …
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_From [zhengj2...@gmail.com](https://code.google.com/u/100840849128868144328/) on June 03, 2013 13:27:54_
Beta Cell Genomics Ontology (BCGO) is an application ontology built for the Beta Cell Genomic…
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Hello and thanks for the nice workflow! I am trying to execute riboseq-flow on some mouse data with the command
`nextflow run iraiosub/riboseq-flow -r v1.1.1 -profile singularity -resume --input sam…