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I think it would be nice to make the `````` element more "meaningful". From what I understand, it doesn't "do" much besides helping CSS abbreviations and maybe a few web scrappers.
I think adding a…
gjvnq updated
4 years ago
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Filing this as an issue as suggested by @emmahodcroft:
GISAID provides an all-sequences download button for SARS-CoV-2 sequences. The provided file is not directly usable as a sequences.fasta file…
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Hi,
Thanks for providing this very useful script! Unfortunately I haven't been able to run ncbitax2lin on the latest taxonomy dump in ncbi. I don't know if NCBI have change the format? It looks li…
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Part of this script parses a json file. The json includes body_text, bibentries, and back_matter fields. After retrieving the value of those fields we attempt to add a newline. I think that is appendi…
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Noticed by @LoraLingrey-TriNetX : There is no special handling for B97.21 and B97.29 included in the OMOP phenotype code; those are our dxs that are treated differently (weak/strong) based on date. Th…
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**Preferred term label:**
Cytokine storm
**Parent term (use hpo.jax.org/app)**
Abnormality of cytokine secretion
see: https://github.com/obophenotype/mammalian-phenotype-ontology/issues/3209
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**name:** pneumonia caused by SARS-CoV-2
**def:** A pneumonia caused by infection with SARS-CoV-2.
**synonym:** pneumonia caused by SARS-CoV-2SARS-CoV-2"
**synonym:** pneumonia caused by SARS-CoV-…
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HDO has included Term [Wuhan seafood market pneumonia virus](https://www.ebi.ac.uk/ols/ontologies/doid/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FNCBITaxon_2697049)
- The original [NCBI tax…
FuqiX updated
4 years ago
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Title: The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) envelope (E) protein harbors a conserved BH3-like motif.
# General Information
## Please paste a link to the paper or a …
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Figshare (Dataset source), Pubmed (Publication source), and others have searchable interfaces and/or APIs which allow us to more or less directly import the metadata about the individual resources, wh…