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# Requester information
Please provide the following information:
- Name: Allison Heath
- Affiliations: CHOP / KFDRC
# Request Details
Please provide the following information about what you wan…
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Hello,
I think the **label_image** is not able to show the segmentation in **view** function in itk 3.5.0. Is there a working example of **view** with **label_image** that I can run in colab? I a…
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hi,I see that you have converted the data of 2017LITS into H5, but there are only 118 cases, while there are 131 cases in LITS. Have you screened some of them?Is there any benefit to this?
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Hi Ivan,
I am wondering, inside the data loader the outputmodes used for different combination of parameter prediction for reaction diffusion model.
But for the mass effect model in the paper table …
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Hello, your work is fantastic, but I have a few questions. I hope you can provide me with some advice.
1. How can I transform the dataset saved in the datapreprocessed folder into the dataset insid…
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## FEATURE REQUEST
### Inspiration
Biological samples are defined by the metadata associated with them. If two samples are identical in every way except the name, they are very likely errant d…
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`chr11 68232231 Minda_18 N N[chr3:192188390[ . PASS SVLEN=824;SVTYPE=BND;SUPP_VEC=ILL_MantaBND:74046:1:2:0:0:0:0,ILL_gridss187ff_7736h,PB_severus_INV1172,PB_ID_48947_2,PB_Sniffles2.INV.245MA,ILL_94946…
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Under `dragen_tso_ctdna_step.py` snippet below; we currently remove samples that have qc selected and only include samples that must be tumor.
https://github.com/umccr/data-portal-apis/blob/f790a68…
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# Description
In the next release of balsamic, v16.0.0, the version of multiqc has changed to ensure that some metrics are correctly picked up. As a side-effect major changes to the outputted json …
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### Description of the bug
> while running the Sarek 3.3.1 pre-processing step on a tumor-normal pair, the pipeline completed successfully, but it only generated the bam file for the normal sample
…