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hi,
when i load my data, i meet some wrong that i dont't know how to solve
~~~R
> methydata
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Hi everyone, I encountered this segmentation fault when performing chromosome-specific step2 analysis using UKBB 500k WES data.
The log file is presented here:
```
Start time: Tue Nov 7 00:20:59 …
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Hi,
Thank you for this nice package.
I'm wondering if it is possible to use custom annotation data?
One of my target gene is CDC42, while it showed ENSG00000289694 in the plot. It will be gre…
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Hello!
Lovely package, but I'm having an issue with manhattan plots when my dataset doesn't contain chrX. The highlight box on chr 22 doesn't appear - I suspect because it is missing a bound?
Ca…
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What were your filters for choosing the UKB snps to include the LD score matrices that you provide? I was surprised to see that many of the included variants have MAF
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https://github.com/bids-standard/bids-specification/blob/6af953770c0f4e1c3536571220c2872acb8296e9/src/schema/rules/checks/dwi.yaml#L30
Need to parse and count rows and add `data` to context just fo…
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The following data needs cleaning up in the cohort field (in both MONGO and oracle databases), prior to making this data available to users.
1. The following should be changed to 'UKB':
UKBB
UK Biob…
ljwh2 updated
11 months ago
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Currently the logic to resolve ld in the study locus dataset is tied to gwas catalog, however this should be general method applicable to any study locus given the population structure from the study …
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Cohort data needs cleaning up before sharing with users, e.g. all instances of UKB/UKBB to be harmonised, RSI-III to be combined, special characters removed.
@earlEBI to add details here of what nee…
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Are they available to the public?