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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/microbiome/mia
Confirm the following by editing e…
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Thanks for the rapid changes. I am not sure why dada2 has an issue.
My config.yaml is unchanged in the threads section:
threads: 4
```
snakemake
KeyError in line 28 of /ngsssd1/rcug/public…
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```
Building DAG of jobs...
Using shell: /bin/bash
Provided cores: 100
Rules claiming more threads will be scaled down.
Job counts:
count jobs
1 recover_mags
1
busco_folder does not poin…
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Hey,
Running into this, after creating a new conda env from scratch
```
(/home/woodcrob/e/binsnek-dev) lyra04:20201114:~/m/msingle-tmp-ben/mess/45_r95_on_wierd_L11/possible_finds/BinSnek$ snake…
wwood updated
3 years ago
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/microbiome/microbiomeDataSets
Confirm the followi…
-
**Description of bug**
When calling `betweenness_centrality()` on a large(ish) *undirected simple Int64 graph with Float64 weights* julia keeps running for a long time unitl a crash due to full RAM.
…
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Hello community, I had a problem with MSFragger:
"**java.lang.OutOfMemoryError: Java heap space**"
My computer:
**Intel(R) Core(TM) i7-8700 CPU @ 3.20GHz 3.19 GHz
32 GB RAM**
**MSfragger ve…
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```
(/home/woodcrob/e/binsnek-dev) cl5n012:20210108:~/m/wierdbin1/ben/57_sample_binning/2_binsnek$ binsnek recover --assembly ~/m/wierdbin1/coassembly/coassembly.spades/scaffolds.fasta --paired_reads…
wwood updated
3 years ago
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All the terms listed below have been approved for inclusion in the new "Food" package to be included in v6. I am adding this list here to enable a history of the new terms to be included in the repo a…
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I tried to run madman (on sdag) but got an error that fastp isn't found:
Command:
`nextflow run maxibor/madman --reads '/projects1/microbiome_calculus/abpCapture/04-analysis/AB_assembly/set1/input…