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Dear,
Is there a function that returns mean expression and percentage of each gene in a cluster ? scanpy.api.pl.dotplot() includes these information implicitly, so perhaps it's the easiest way to ret…
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Hi @JiaxuanYou ,
I tried to run this code but got following error:
`python main.py
Traceback (most recent call last):
...........
from utils import *
File "/XXXX/GraphGeneration/GraphRNN/ut…
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Currently, we use hierarchical agglomerative clustering (HAC) to decide which sets of records refer to the same entity.
Incrementally, this method has been relatively easy to implement, but it has…
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## DaggerGraphs
- https://github.com/JuliaParallel/Dagger.jl/pull/448
- Huge graphs with partitioned structure and metadata
- Merge is close thanks to @jpsamaroo
- Order of magnitude: hundreds o…
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I think we did a pretty good job at writing an analysis for the HIVE applications, a similar analysis should be done for the other applications. This is a good project for new students who are interes…
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I am installed conga in 29. Oct 2022 following conga readme.md.
conda create -n conga_new_env ipython python=3.6
conda activate conga_new_env # or: "source activate conga_new_env" depending …
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Running STAligner successfully, but getting an error when clustering:
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**Is your feature request related to a problem? Please describe.**
Clustergrammer2 can visualize matrices with ~10 million matrix cells, but slows down when there are too many columns or rows (>20,00…
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I am experiencing this exact same issue. In my graph I have specified a color under E(g)$color that I want to use, and it is not working. It is taking the default colors used in ggplot2.
I have tri…