issues
search
zhoux85
/
STAligner
STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.
MIT License
29
stars
5
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
train_STAligner RuntimeError: Cannot return the results in a contigious 2D array. Probably ef or M is too small
#29
t-a-m-i
opened
1 day ago
0
unable to install dependencies using requirement.txt file
#28
owenwilkins
opened
4 days ago
0
Inconsistency in tutorial workflows
#27
t-a-m-i
closed
4 days ago
1
About How to save the adata_contact
#26
Sawakotx
closed
4 days ago
2
about cluster
#25
Yingxinzz
closed
1 month ago
1
use of 'iter_comb' and 'margin' parameters in train_STAligner
#24
owenwilkins
opened
2 months ago
5
Installing error after following the instructions
#23
HelloWorldLTY
closed
2 months ago
1
Can spatial domain guided 3D slice alignment be used for 10X data
#22
HaixJiang
opened
3 months ago
1
How to integrate mouse brain sagittal anterior and posterior slices
#21
sarahshuang
opened
3 months ago
0
Handling of Alzheimer's Samples
#20
wang-youzi
opened
5 months ago
3
Hidden Layers
#19
davidrm-bio
opened
5 months ago
1
AttributeError when running Cal_Spatial_Net
#18
ysun996
opened
5 months ago
1
about torch-sparse
#17
0225yyyyyqq
opened
7 months ago
1
How to reconstruct gene expression matrix after integrating?
#16
VivLon
opened
9 months ago
0
Illlegal instruction
#15
ulloaa
opened
9 months ago
1
Question about random seeds
#14
czwdcm
opened
9 months ago
1
Error about out of memory.
#13
DBinary
opened
11 months ago
3
error import mnn_utils
#12
mkunst23
closed
11 months ago
2
example data for Tutorial 5: Spatial domain guided 3D slices alignment
#11
mkunst23
closed
11 months ago
2
Error during constructing the spatial network
#10
OMIC-coding
opened
1 year ago
5
Where is the count matrix and genetic information stored?
#9
yanglq-bioinfo
opened
1 year ago
4
Import Error
#8
OMIC-coding
opened
1 year ago
4
Tutorial 4 Running STAligner Error
#7
leonli1010
closed
1 year ago
2
import error
#6
yuntwang
opened
1 year ago
6
A question about the tutorial of DLPFC dataset
#5
JingofGao
closed
1 year ago
1
Questionable ST quality on drosophylia sample
#4
vladimirkovacevic
closed
1 year ago
1
Processing error with MOSTA mouse embryo samples
#3
vladimirkovacevic
closed
1 year ago
4
Can't install Python environment for STAligner
#2
vladimirkovacevic
closed
1 year ago
2
Import Error
#1
TLFPss
closed
1 year ago
2