-
Following #1507 ... we need to ensure that the previous `disclosure.pdf` files that have been generated in production are fixed/recreated to be correct. This may entail creating a script.
Currently…
-
Hey Pete,
The script for exporting annotations as binary masks here [https://petebankhead.github.io/qupath/scripting/2018/03/13/script-export-import-binary-masks.html](url) works perfectly and is sup…
-
@deustp01 I'm curious what you think of this one. For the pathway 'HATs acetylate histones', given the current conversion (not what is up on dev as of right now), the reasoner infers a logical incons…
goodb updated
5 years ago
-
hello,
How can I quantify IHC membrane staining using QuPath software?
Thank you
-
This is easy to reproduce and I tried on serveral templates using latest G5.2.16
E.g Topaz add a new child menu item to "about us" or "coming soon" in "page" menu item(which is multicolumn layout). L…
ghost updated
5 years ago
-
Dear All,
I was analyzing a fluorescent tissue with 4 channels and after having performed Tissue detection followed by Watershed Cell detection, I realized that the detection measurement table does…
-
Kim wished that figure 3 was interactive.
This lead to a li…
-
Hello,
i've just started using the program recenlty and have issues with setting automatic quantification of PDL1 positive cells... or any positive cells in that matter. The wiki didn't help enough, …
-
Hi,
I am trying to run the classifier the same as shown in the directions on how to do this (https://github.com/qupath/qupath/wiki/Classifying-objects).
Using only 2 annotations, tumor and stroma.…
-
```
import os
import sys
import random
import math
import re
import time
import numpy as np
import cv2
import matplotlib
import matplotlib.pyplot as plt
import pandas as pd # data process…