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I put in some 'analysis' class examples with not-yet-defined KiSAO terms. Once they're defined, the spec needs to be updated.
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Some VCell simulations are failing in RunBioSimulations. See errors below. The reason may because of differences in permissions when the Docker image is converted to Singularity. I also say this becau…
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---
id: vcell
version: 7.4.0.26
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.4.0.26/biosimulators.json
specificationsPatch:
version: 7.4.0.26
image:
url: ghcr.io…
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---
id: cobrapy
version: 0.22.1
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_COBRApy/eccb9db64e44b41e026708957f12983e4bb1a24a/biosimulators.json
specificationsP…
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The following terms have incorrect ids (the trailing `_` is incorrect):
```
http://www.biomodels.net/kisao/KISAO#_KISAO_0000800
http://www.biomodels.net/kisao/KISAO#_KISAO_0000801
http://www.biomo…
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- [x] [ERO tracker](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/909): 'tracker' is a recommended property
- [x] KISAO tracker: 'tracker' is a recommended property
- [x] [MS tracker](ht…
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---
id: opencor
version: "2021-10-05"
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_OpenCOR/a87fe89ce643c4707cb53b1c801a7fc2313cd3b1/biosimulators.json
specification…
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- Service is `up`
- Upptime says status is `up`
- Health endpoint says status is `down`
- It appears that the health endpoint isn't connecting to the COMBINE service
[Status summary](https://git…
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@shoops @fbergmann @pmendes I'm creating a separate thread for the discussion that @shoops initiated in #46.
> Helllo Jonathan,
>
> I think a better approach would be to let COPASI read the SED-M…
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---
id: bionetgen
version: 2.7.0
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_BioNetGen/73ac147a5b1a3cc47508c6b4e78de0ed9222028a/biosimulators.json
specificationsPa…