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Note: the issue was created automatically with bugzilla2github tool
Original bug ID: BZ#49
From: paulin@lri.fr
Reported version: 8.1
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Hi @yksoft1 - I posted some info here on this https://github.com/joncampbell123/dosbox-x/issues/882 - but wanted to post on your fork as I'm testing both with no success. My goal is to have an emscrip…
gr33k updated
5 years ago
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Hello Haibao,
Could you tell me how i can draw correlation plots per chromosome but for a single map and not all the maps which were used for chromosome construction in ALLMAPS?
Could i just pa…
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Hi,
I try merging and anchoring scaffolds from two genetic maps with following command:
```
python -m jcvi.assembly.allmaps path --cpus 8 F2_K.pein102.map_ABH.finalOUT.allmaps.bed Peinf.genome.v1…
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Hello - I've been trying to get this plugin to package from source for a few days now.
I got the source working through Visual Studio, but as soon as I go to package I just keep hitting one error…
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Hi,
Would it be possible to direct me to the part of the script where the scaffold positions are translated to the genomic positions?
I have a set of genic coordinates of the scaffolds and I wou…
Homap updated
7 years ago
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Hi,
I have used ALLMAPS many times, but this is the first time I use 11 genetic maps.
The commands `python -m jcvi.assembly.allmaps merge ...` and `python -m jcvi.assembly.allmaps path ...` conclude…
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Traceback (most recent call last):
File "/software/lib64/python2.7/runpy.py", line 162, in _run_module_as_main
"__main__", fname, loader, pkg_name)
File "/software/lib64/python2.7/runpy.py"…
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For my assembly, I have the orientation of scaffolds determined by HiC data and genetic map. I can use genetic map only to orient scaffold using ALLmaps. But how could I add the orientation provided b…
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Hi,
I was wondering when concatenating scaffolds reported in the file (file.lifted.bed), what is the gap
length inserted between the two scaffolds?
In some cases in other genomes, for example t…
Homap updated
7 years ago