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Hi @hroest ,
I'm using OpenSwath to analyze DIA data acquired from QEHF, and an error occurred when I ran OSW with generated pqp file.
The error was caused by some decoy peptides which got same s…
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Any ideas on how to silence those?
`warning: /Users/distiller/project/miniconda/conda-bld/openms_1580309845735/work/src/pyOpenMS/pxds/NASequence.pxd:103:8: 'ZIon' redeclared`
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Hi everyone,
I have a wrapping issue and not sure how to solve it:
example code:
```
from Types cimport *
from libcpp.vector cimport vector as libcpp_vector
from libcpp.unordered_map cimpo…
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in
20
21 file_description.size = feature_map.size()
---> 22 file_description.unique_id = feature_map.getUniqueId()
23 print(file_description.unique_id)
24 f…
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I was unable to find a commitment to a specific versioning scheme. Wouldn't it make sense to commit to one so other tools know what to expect? e.g. https://github.com/fabianegli/proteomicslfq/blob/dev…
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There is some non-intuitive behavior when using CoarseIsotopePatternGenerator together with EmpiricalFormula
```
>>> ef = pyopenms.EmpiricalFormula ("C6H12O6");
>>> gen = pyopenms.CoarseIsotopePa…
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CMakeList.txt
```
# simple wrapper script to submit to cdash
# execute a single command and report as individual test result (e.g., to report overall build results)
project(cmake_test_wrapper NONE…
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### Description of the bug
Im processing a dataset using proteomicsLFQ and it fails when it found empty list of peptides in one of the idXMLs.
```
TOPPBase.cpp(1605): Value of string option 'kee…
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Follow-up the the packages in conda (`62`), that they are active but they don't exist in quay.io.
```
['scvis_galaxy', 'libdb', 'roprofile', 'pictrust', 'icqsol', 'ngs-sdk', 'perl-bio-db-sam', 'b…