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```python
File ~/Soft/nb2workflow/nb2workflow/nbadapter.py:1096, in validate_oda_dispatcher(nba, optional, machine_readable)
1094 raise
1095 else:
-> 1096 nbpq = NB2WProductQuery…
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This stems from https://github.com/geneontology/pipeline/issues/397
Basically, the mapping of relation labels to IDs is hard-coded in ontobio and we want to fix that.
https://github.com/biolink/…
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We can use a drop down list with multiple select or something like this since we have a big number of projets
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We should be able to report all `env_broad_scale`, `env_local_scale` and `env_medium` values in two dimensions of contextuality:
### MongoDB or postgres (SubmissionPortal)
- prod
- dev
- ~sandbox~
- …
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When adding/suggesting an ontology via http://archivo.dbpedia.org/add, and upon a successful "suggestion" there is lack of informative message. For example, if the ontology is successfully accepted, t…
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An attribute points to a an imf:predicate. This predicate has a description. If we add qualifiers and units of measure at the type-level the overall meaning of the attribute changes.
Users are oft…
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Hello,
I found this repository while searching for methods to extract metadata from my graph stored in GraphDB (currently on my local PC), and it seems very helpful for my use case.
I attempted …
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from field notes testing:
- storage conditions - values are an enumeration but the example is free text
- depth - pattern constraint requires a range but example lists a integer.
- growth facilit…
aclum updated
1 month ago
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using xiaohan's ontology information to query on omoponfhir
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The set of ontologies should be split up into more sections:
- Core modules
- Supplementary modules
- Reused ontologies
- Use-case ontologies
Note that this re-organization is not change the na…
keski updated
5 months ago