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http://doi.org/10.1021/acs.jproteome.6b00618 (http://pubs.acs.org/doi/abs/10.1021/acs.jproteome.6b00618)
> Identifying interactions between known drugs and targets is a major challenge in drug repo…
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Hi,
Thanks for your code.
I'm doing research related to dynamic graphs. Datasets with information including node attributes, node labels and dynamic links are needed.
In the SNAP website, I canot…
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Migrating this comment rom @procacci in #9 here for better tracking:
> My feelings on this, future (bCDs), and on past (CB8) host-guest
> challenges are that the focus is too much on force fields …
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Configuration file: db_main.toml
Description: miRDB is an online database for miRNA target prediction and functional annotations.
```toml
[db_mirdb]
source_url = "http://mirdb.org/download/miRDB…
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During the rerun step, `gmx mdrun -rerun` is used to obtain potential energies of each of the sampled conformations of the system using every hamiltonian. During this process, if the potential energy …
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Hi all,
This is such an awesome review, and i'd love to use it as a basis for teaching, but i've had to jump back-and-forth through sections, as the current structure doesn't flow as naturally for a …
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• p.1
– “that can exists” → “that can exist”
• p.5
– “such as protein, a nucleic acid, metabolite” → “such as a protein, nucleic acid, metabolite”
• p.6
– “An outcome represent a particular” → “A…
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COB ‘molecular entity’ definition: "A material entity that consists of two or more atoms that are all connected via covalent bonds such that any atom can be transitively connected with any other atom.…
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The idea is to make a specific case to predict how interactions change after the deletion of 1/2/multiple genes starting from the specific case of the polarity network, which would allow us to include…
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Hi Sebastian,
We are trying to create Protein-Go edges for our database. In our data, there are multiple edge types between same source and target node. However, as far as I look, BioCypher doesn'…