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I have been trying to run xcpEngine using version 1.2.2 for a number of patients but it seems for some reason the fcon output files are generated but are left empty.
I'm using singularity to bind …
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Running teh commands:
```
fcov
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I've been playing with this package using the Ionosphere dataset and when I get to plotting the standardized loadings and communalities with barmaps, the confidence intervals are not located at the ti…
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Thank you for the great package. I think there must be something obvious that I am missing in the setup (so apologise if that is the case but I can seem to find it) because I have seen some similar er…
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I’ve been trying to use the `bigsnpr` package to read the UK Biobank genetics data, but it seems that I can’t really replicate [your code](https://github.com/privefl/UKBiobank/blob/master/UKB4-BMI.R).…
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I just wondered if I use Pacbio HiFi reads, which are supposed to have lower error rates, is it still a requirement of illumina short reads to run the pipeline? Thanks very much! Best, Tao
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/dataMaster-Kris/dStruct
Confirm the following by …
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Hello, since using ouput from the GRCh38 reference build for cellranger-atac 2.0.0 (refdata-cellranger-arc-GRCh38-2020-A-2.0.0), I am having issues related to scaffold annotation specifically during t…
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When I set ids (to a factor) it doesn't seem to show up in the bchronology object produced anywhere.
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Is there currently a way to predict new data into the PCA space returned by PLNPCA? I can find a rotation matrix but I can't seem to identify a center or scaling vector.